Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Gm35172-201ENSMUST00000196037 2649 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm43196-201ENSMUST00000201762 2114 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
Sox1P53783 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm24790-201ENSMUST00000104285 132 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm11256-201ENSMUST00000118109 829 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm5793-201ENSMUST00000119393 630 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm5943-201ENSMUST00000119458 459 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm13339-201ENSMUST00000120651 510 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm12438-201ENSMUST00000122034 336 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm25052-201ENSMUST00000122661 158 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Snora47-201ENSMUST00000157483 138 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm22847-201ENSMUST00000157707 105 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm24011-201ENSMUST00000157732 268 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm21241-201ENSMUST00000179551 934 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm26557-201ENSMUST00000180756 493 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm27659-201ENSMUST00000183472 98 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm28489-201ENSMUST00000186655 316 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm6693-201ENSMUST00000189583 813 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm42437-201ENSMUST00000197263 923 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm18452-201ENSMUST00000202968 1111 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm7769-201ENSMUST00000212900 933 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm6477-201ENSMUST00000217098 764 ntBASIC7.34□□□□□ -1.23
Sox1P53783 AC122301.1-201ENSMUST00000219625 507 ntBASIC7.34□□□□□ -1.23
Sox1P53783 AC132121.1-201ENSMUST00000220774 332 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm5928-201ENSMUST00000221839 466 ntBASIC7.34□□□□□ -1.23
Sox1P53783 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC7.34□□□□□ -1.23
Sox1P53783 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Mir465-201ENSMUST00000093563 74 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Sox1P53783 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Gm44007-201ENSMUST00000203845 2189 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Gm43917-201ENSMUST00000191984 2360 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.34□□□□□ -1.23
Sox1P53783 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Sox1P53783 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Sox1P53783 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Sox1P53783 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Sox1P53783 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Sox1P53783 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Sox1P53783 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Sox1P53783 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.33□□□□□ -1.24
Sox1P53783 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Sox1P53783 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Sox1P53783 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms