Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm22300-201ENSMUST00000082661 126 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC8.4□□□□□ -1.06
Col18a1P39061 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC8.4□□□□□ -1.06
Col18a1P39061 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col18a1P39061 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 AC122357.3-201ENSMUST00000221260 2293 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC8.4□□□□□ -1.07
Col18a1P39061 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col18a1P39061 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col18a1P39061 Gm12788-201ENSMUST00000119090 308 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Gm14906-201ENSMUST00000119265 390 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Gm6113-201ENSMUST00000180319 639 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC8.4□□□□□ -1.07
Col18a1P39061 Gm43743-202ENSMUST00000198353 491 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Gm8039-201ENSMUST00000204758 712 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Gm2614-201ENSMUST00000223227 403 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Gm22053-201ENSMUST00000083394 200 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Col18a1P39061 Gm38085-201ENSMUST00000195785 3062 ntBASIC8.4□□□□□ -1.07
Col18a1P39061 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.4□□□□□ -1.07
Col18a1P39061 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Col18a1P39061 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col18a1P39061 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Col18a1P39061 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Col18a1P39061 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gm8545-201ENSMUST00000120692 801 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gm11787-201ENSMUST00000121996 1050 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC8.39□□□□□ -1.07
Col18a1P39061 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC8.39□□□□□ -1.07
Col18a1P39061 Ear-ps5-201ENSMUST00000164700 463 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC8.39□□□□□ -1.07
Col18a1P39061 Gm21399-201ENSMUST00000180210 597 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gm19065-202ENSMUST00000203910 1165 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC8.39□□□□□ -1.07
Col18a1P39061 AC117949.2-201ENSMUST00000225900 584 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 AC154626.1-201ENSMUST00000226070 311 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col18a1P39061 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col18a1P39061 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col18a1P39061 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.39□□□□□ -1.07
Col18a1P39061 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.39□□□□□ -1.07
Col18a1P39061 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col18a1P39061 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm14900-201ENSMUST00000120304 733 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm7670-201ENSMUST00000121272 641 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Col18a1P39061 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Mir7031-201ENSMUST00000183860 65 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC8.38□□□□□ -1.07
Col18a1P39061 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm37241-201ENSMUST00000191736 523 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 Gm42961-201ENSMUST00000202023 181 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Gm6290-201ENSMUST00000207666 1158 ntBASIC8.38□□□□□ -1.07
Col18a1P39061 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC8.38□□□□□ -1.07
Col18a1P39061 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms