Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm3650-201ENSMUST00000180600 747 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm32158-201ENSMUST00000200135 404 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.08□□□□□ -1.28
Col2a1P28481 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col2a1P28481 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Col2a1P28481 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm36936-201ENSMUST00000194508 2749 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col2a1P28481 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.08□□□□□ -1.28
Col2a1P28481 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col2a1P28481 Gm11516-201ENSMUST00000118450 1582 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.07□□□□□ -1.28
Col2a1P28481 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.07□□□□□ -1.28
Col2a1P28481 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col2a1P28481 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col2a1P28481 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.07□□□□□ -1.28
Col2a1P28481 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col2a1P28481 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Gm5073-201ENSMUST00000118222 820 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Gm14970-201ENSMUST00000122289 355 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.07□□□□□ -1.28
Col2a1P28481 Snora47-201ENSMUST00000157483 138 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Mir5125-201ENSMUST00000175240 79 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC7.07□□□□□ -1.28
Col2a1P28481 Gm44219-201ENSMUST00000203005 273 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.07□□□□□ -1.28
Col2a1P28481 Gm19116-201ENSMUST00000218592 642 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Gm18413-201ENSMUST00000221573 655 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 AC164302.1-201ENSMUST00000227036 433 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col2a1P28481 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col2a1P28481 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col2a1P28481 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col2a1P28481 Gm38451-201ENSMUST00000208329 2646 ntBASIC7.07□□□□□ -1.28
Col2a1P28481 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Col2a1P28481 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Col2a1P28481 Gm25345-201ENSMUST00000104505 133 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Gm11984-201ENSMUST00000118142 766 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm14783-201ENSMUST00000118900 663 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm11198-201ENSMUST00000119771 974 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm13338-201ENSMUST00000120235 361 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC7.06□□□□□ -1.28
Col2a1P28481 Mir3097-201ENSMUST00000175356 67 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.06□□□□□ -1.28
Col2a1P28481 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm21399-201ENSMUST00000180210 597 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm27006-201ENSMUST00000182218 943 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7.06□□□□□ -1.28
Col2a1P28481 Gm5436-201ENSMUST00000058103 643 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Gm24029-201ENSMUST00000083928 143 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Col2a1P28481 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Gm12057-201ENSMUST00000117244 1427 ntBASIC7.06□□□□□ -1.28
Col2a1P28481 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col2a1P28481 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC7.06□□□□□ -1.28
Col2a1P28481 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.06□□□□□ -1.28
Col2a1P28481 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col2a1P28481 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Gm13531-201ENSMUST00000121893 543 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Col2a1P28481 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.05□□□□□ -1.28
Col2a1P28481 Gm22690-201ENSMUST00000175054 110 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col2a1P28481 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 Gm18444-201ENSMUST00000191239 629 ntBASIC7.05□□□□□ -1.28
Col2a1P28481 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC7.05□□□□□ -1.28
Col2a1P28481 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms