Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm24733-201ENSMUST00000158863 253 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm10410-201ENSMUST00000180138 384 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm26898-201ENSMUST00000181678 384 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm37103-201ENSMUST00000191830 115 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Gm18592-201ENSMUST00000221529 276 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Gm9293-201ENSMUST00000223096 306 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a2P25318 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col8a2P25318 Gm37611-201ENSMUST00000195250 2028 ntBASIC5.18□□□□□ -1.58
Col8a2P25318 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a2P25318 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm14755-201ENSMUST00000118037 384 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Gm15616-201ENSMUST00000118662 375 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Gm14925-201ENSMUST00000120611 438 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm6541-201ENSMUST00000165542 561 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Gm20778-201ENSMUST00000178524 627 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.17□□□□□ -1.58
Col8a2P25318 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm45724-201ENSMUST00000213031 420 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a2P25318 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a2P25318 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Col8a2P25318 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.17□□□□□ -1.58
Col8a2P25318 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC5.17□□□□□ -1.58
Col8a2P25318 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col8a2P25318 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a2P25318 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a2P25318 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
Col8a2P25318 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col8a2P25318 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a2P25318 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Col8a2P25318 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col8a2P25318 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a2P25318 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a2P25318 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.16□□□□□ -1.58
Col8a2P25318 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a2P25318 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a2P25318 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a2P25318 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.16□□□□□ -1.58
Col8a2P25318 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Col8a2P25318 Gm22952-201ENSMUST00000116720 120 ntBASIC5.16□□□□□ -1.58
Col8a2P25318 Gm11533-201ENSMUST00000120287 477 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms