Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Sdc1P18828 Mir763-201ENSMUST00000103249 120 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm26417-201ENSMUST00000104274 135 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm22152-201ENSMUST00000116966 125 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm11903-201ENSMUST00000118958 727 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm16511-201ENSMUST00000120019 564 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm12599-201ENSMUST00000120534 792 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm15160-201ENSMUST00000120553 907 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm12459-201ENSMUST00000120659 356 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.01□□□□□ -1.61
Sdc1P18828 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm17022-201ENSMUST00000166415 922 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm23632-201ENSMUST00000175289 125 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm18254-201ENSMUST00000185699 1204 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm28142-201ENSMUST00000186899 698 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm38135-201ENSMUST00000195068 502 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm29736-201ENSMUST00000198189 385 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm44623-201ENSMUST00000207934 434 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.01□□□□□ -1.61
Sdc1P18828 Rpl32l-201ENSMUST00000216127 399 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm18405-201ENSMUST00000220743 511 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 AC154747.4-201ENSMUST00000224802 903 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sdc1P18828 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Sdc1P18828 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sdc1P18828 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sdc1P18828 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sdc1P18828 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm23686-201ENSMUST00000083241 164 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Sdc1P18828 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.01□□□□□ -1.61
Sdc1P18828 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.01□□□□□ -1.61
Sdc1P18828 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sdc1P18828 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sdc1P18828 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Sdc1P18828 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Gm15238-201ENSMUST00000119938 1296 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm14070-201ENSMUST00000120773 428 ntBASIC5□□□□□ -1.61
Sdc1P18828 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC5□□□□□ -1.61
Sdc1P18828 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm7502-201ENSMUST00000169235 733 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5□□□□□ -1.61
Sdc1P18828 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm28885-201ENSMUST00000185615 563 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm5734-201ENSMUST00000189787 913 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5□□□□□ -1.61
Sdc1P18828 Gm43561-201ENSMUST00000199866 448 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm7452-201ENSMUST00000200764 788 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm21048-201ENSMUST00000202470 1166 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5□□□□□ -1.61
Sdc1P18828 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5□□□□□ -1.61
Sdc1P18828 Gm45405-201ENSMUST00000211544 609 ntBASIC5□□□□□ -1.61
Sdc1P18828 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms