Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37570-201ENSMUST00000195411 3106 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 AL670757.1-201ENSMUST00000223668 1959 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm19125-201ENSMUST00000188408 1383 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Gm14220-201ENSMUST00000118114 449 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.32□□□□□ -1.24
Col1a1P11087 Scarna6-201ENSMUST00000158656 265 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 AC122332.1-201ENSMUST00000214384 285 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 CT030170.4-202ENSMUST00000221109 540 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Gm18413-201ENSMUST00000221573 655 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 AC161884.2-201ENSMUST00000224513 227 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Gm24525-201ENSMUST00000082917 151 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Gm24041-201ENSMUST00000083115 156 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col1a1P11087 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col1a1P11087 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col1a1P11087 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.32□□□□□ -1.24
Col1a1P11087 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Col1a1P11087 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col1a1P11087 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.31□□□□□ -1.24
Col1a1P11087 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col1a1P11087 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC7.31□□□□□ -1.24
Col1a1P11087 Gm16531-201ENSMUST00000180658 967 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.31□□□□□ -1.24
Col1a1P11087 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.31□□□□□ -1.24
Col1a1P11087 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col1a1P11087 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col1a1P11087 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.31□□□□□ -1.24
Col1a1P11087 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Col1a1P11087 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
Col1a1P11087 AC154461.6-201ENSMUST00000224815 2630 ntBASIC7.31□□□□□ -1.24
Col1a1P11087 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col1a1P11087 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col1a1P11087 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm24230-201ENSMUST00000104313 129 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm16179-201ENSMUST00000120685 373 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm25824-201ENSMUST00000157092 121 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm22596-201ENSMUST00000157601 316 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm20397-201ENSMUST00000174520 362 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Col1a1P11087 Igkv4-56-201ENSMUST00000198436 349 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm43222-201ENSMUST00000199013 603 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm42814-201ENSMUST00000199370 460 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm28392-201ENSMUST00000077630 393 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm23502-201ENSMUST00000083902 145 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms