Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm8250-201ENSMUST00000117398 774 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm13455-201ENSMUST00000118767 517 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm14018-201ENSMUST00000119042 455 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm22428-201ENSMUST00000158554 132 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm22094-201ENSMUST00000158976 117 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm27853-201ENSMUST00000184176 250 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm8506-201ENSMUST00000186661 829 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm28586-201ENSMUST00000189857 456 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm29160-201ENSMUST00000190094 699 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm38237-201ENSMUST00000193366 376 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm44225-201ENSMUST00000203582 186 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm2225-201ENSMUST00000209570 377 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm9685-201ENSMUST00000211275 538 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm9788-201ENSMUST00000057038 906 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Chmp6P0C0A3 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Robo2-210ENSMUST00000226478 8059 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 AU020206-202ENSMUST00000206358 3009 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm24069-201ENSMUST00000104512 127 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm26557-201ENSMUST00000180756 493 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm43354-201ENSMUST00000196862 346 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm45448-201ENSMUST00000211739 209 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Chmp6P0C0A3 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.81□□□□□ -1.32
Chmp6P0C0A3 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Chmp6P0C0A3 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Chmp6P0C0A3 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Chmp6P0C0A3 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Chmp6P0C0A3 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Chmp6P0C0A3 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Chmp6P0C0A3 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Chmp6P0C0A3 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms