Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm45360-201ENSMUST00000210698 1405 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Hmgb3O54879 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hmgb3O54879 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Hmgb3O54879 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.03□□□□□ -1.6
Hmgb3O54879 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm14098-201ENSMUST00000119295 623 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm16184-201ENSMUST00000162324 573 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm23018-201ENSMUST00000177928 109 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm28620-201ENSMUST00000190463 439 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm19124-201ENSMUST00000191041 832 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm37375-201ENSMUST00000193859 387 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm37385-201ENSMUST00000195223 387 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm43013-201ENSMUST00000198216 247 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm7463-201ENSMUST00000201541 547 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm43798-201ENSMUST00000202056 394 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm7832-201ENSMUST00000202613 880 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm4605-201ENSMUST00000203148 625 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm43867-201ENSMUST00000203860 525 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm17994-201ENSMUST00000209260 533 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Mir412-201ENSMUST00000083636 80 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.02□□□□□ -1.61
Hmgb3O54879 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hmgb3O54879 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Hmgb3O54879 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm25757-201ENSMUST00000103986 123 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm12468-201ENSMUST00000116189 404 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm8855-201ENSMUST00000118888 878 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm11504-201ENSMUST00000120211 173 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm13877-201ENSMUST00000120614 417 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm3810-201ENSMUST00000122413 476 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm23259-201ENSMUST00000158318 303 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm7651-201ENSMUST00000173398 901 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm23632-201ENSMUST00000175289 125 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm44370-201ENSMUST00000175436 112 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm18709-201ENSMUST00000180564 489 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms