Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col4a6B1AVK5 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col4a6B1AVK5 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col4a6B1AVK5 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Col4a6B1AVK5 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col4a6B1AVK5 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.44□□□□□ -1.38
Col4a6B1AVK5 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col4a6B1AVK5 Gm13081-201ENSMUST00000121527 5599 ntBASIC6.44□□□□□ -1.38
Col4a6B1AVK5 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm15531-201ENSMUST00000118062 252 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm13493-201ENSMUST00000120318 493 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm21399-201ENSMUST00000180210 597 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Mir6337-201ENSMUST00000184194 105 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm28443-201ENSMUST00000189081 698 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Col4a6B1AVK5 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm13866-201ENSMUST00000118901 968 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm15120-201ENSMUST00000120602 301 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm3053-201ENSMUST00000161709 616 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Mir6994-201ENSMUST00000198985 73 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm43456-201ENSMUST00000202519 457 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm18689-201ENSMUST00000203969 902 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm45596-201ENSMUST00000209279 434 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm14755-201ENSMUST00000118037 384 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm13887-201ENSMUST00000119009 344 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm11804-201ENSMUST00000121663 468 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm22492-201ENSMUST00000157192 297 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Mir6926-201ENSMUST00000184562 68 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Gm23502-201ENSMUST00000083902 145 ntBASIC6.42□□□□□ -1.38
Col4a6B1AVK5 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms