Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm24472-201ENSMUST00000104484 132 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm11410-201ENSMUST00000120053 1143 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm12307-201ENSMUST00000120581 590 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm12499-201ENSMUST00000121961 546 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm14349-201ENSMUST00000137155 902 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm23981-201ENSMUST00000157136 106 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm9399-201ENSMUST00000175771 639 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm27964-201ENSMUST00000185195 62 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm7560-201ENSMUST00000187748 873 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm28980-201ENSMUST00000187877 219 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm28864-201ENSMUST00000189251 644 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm17970-201ENSMUST00000192199 685 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm43383-201ENSMUST00000195981 469 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm19185-201ENSMUST00000196365 643 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm18971-201ENSMUST00000197240 374 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 AC145736.1-201ENSMUST00000214661 479 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Olfr1255-201ENSMUST00000057369 933 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm28497-201ENSMUST00000189646 3029 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Klf5-202ENSMUST00000226784 2852 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Gm42645-201ENSMUST00000201573 1627 ntBASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim39Q9ESN2 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Zfp640-202ENSMUST00000224116 1562 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm23706-201ENSMUST00000104369 82 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm22771-201ENSMUST00000104449 91 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm11207-201ENSMUST00000117824 414 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm8662-201ENSMUST00000118644 574 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm13649-201ENSMUST00000122325 606 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm23883-201ENSMUST00000122686 290 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms