Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nkx6-1Q99MA9 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Nkx6-1Q99MA9 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm14007-201ENSMUST00000118288 210 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm14727-201ENSMUST00000118526 525 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm13902-201ENSMUST00000120168 605 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm5166-201ENSMUST00000121332 573 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm14721-201ENSMUST00000121381 525 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm14589-201ENSMUST00000121640 727 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm12540-201ENSMUST00000121938 319 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm12778-201ENSMUST00000122341 333 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm10913-201ENSMUST00000133732 463 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm8245-201ENSMUST00000182434 987 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm29073-201ENSMUST00000185563 664 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm29165-201ENSMUST00000190655 664 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm29211-201ENSMUST00000191470 664 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm44023-201ENSMUST00000203710 469 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm8556-201ENSMUST00000210437 664 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm19170-201ENSMUST00000212440 1084 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Cma2-202ENSMUST00000228263 857 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 AC121114.1-201ENSMUST00000228522 570 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nkx6-1Q99MA9 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nkx6-1Q99MA9 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms