Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ndc1Q8VCB1 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm22256-201ENSMUST00000102291 107 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm2178-201ENSMUST00000104927 357 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm12392-201ENSMUST00000118014 938 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm12090-201ENSMUST00000118692 758 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm9435-201ENSMUST00000120379 877 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm12444-201ENSMUST00000121512 877 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm15534-201ENSMUST00000137642 562 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm24545-201ENSMUST00000158651 85 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm37620-201ENSMUST00000192910 501 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm4859-201ENSMUST00000199625 787 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm44353-201ENSMUST00000200618 138 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm9800-201ENSMUST00000052615 336 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm5436-201ENSMUST00000058103 643 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Ndc1Q8VCB1 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Ndc1Q8VCB1 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm25877-201ENSMUST00000104326 129 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm24236-201ENSMUST00000157794 134 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm24363-201ENSMUST00000158440 311 ntBASIC6.52□□□□□ -1.37
Ndc1Q8VCB1 Gm9672-201ENSMUST00000166437 425 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms