Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm25564-201ENSMUST00000104604 132 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Snord88a-201ENSMUST00000116723 90 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm14614-201ENSMUST00000119873 384 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm13357-201ENSMUST00000120528 537 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm22035-201ENSMUST00000157284 228 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm23632-201ENSMUST00000175289 125 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm26509-201ENSMUST00000180947 948 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm27866-201ENSMUST00000184459 171 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm27998-201ENSMUST00000184902 361 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm44342-201ENSMUST00000196874 129 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm44383-201ENSMUST00000198940 129 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm32158-201ENSMUST00000200135 404 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm4605-201ENSMUST00000203148 625 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm6009-201ENSMUST00000210848 280 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Mir3068-201ENSMUST00000083004 136 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc28bQ8CEG5 Gm14667-201ENSMUST00000119448 1350 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm13991-201ENSMUST00000120190 648 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm12499-201ENSMUST00000121961 546 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm16138-201ENSMUST00000159341 821 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm16184-201ENSMUST00000162324 573 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm25640-201ENSMUST00000175378 125 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm29141-201ENSMUST00000190357 882 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm36965-201ENSMUST00000193797 394 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm20690-202ENSMUST00000195126 355 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm43048-201ENSMUST00000196101 388 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm7832-201ENSMUST00000202613 880 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm5586-201ENSMUST00000206264 795 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm45279-201ENSMUST00000210315 391 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm7557-201ENSMUST00000221935 865 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.18□□□□□ -1.42
Ccdc28bQ8CEG5 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms