Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.52□□□□□ -1.2
Vps53Q8CCB4 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Vps53Q8CCB4 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Vps53Q8CCB4 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Vps53Q8CCB4 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Vps53Q8CCB4 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Vps53Q8CCB4 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Mir678-201ENSMUST00000102114 84 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm15181-201ENSMUST00000120142 177 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm7113-201ENSMUST00000120477 958 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm23450-201ENSMUST00000178285 91 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm27348-201ENSMUST00000184511 170 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm27653-201ENSMUST00000185037 136 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm29160-201ENSMUST00000190094 699 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm18660-201ENSMUST00000199542 629 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm4083-201ENSMUST00000207158 451 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm35619-201ENSMUST00000222548 600 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Vps53Q8CCB4 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm15750-201ENSMUST00000120970 616 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm26023-201ENSMUST00000122722 313 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.51□□□□□ -1.21
Vps53Q8CCB4 Gm25675-201ENSMUST00000174979 118 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms