Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm14520-201ENSMUST00000119258 387 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm26489-201ENSMUST00000157880 264 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm23632-201ENSMUST00000175289 125 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm27887-201ENSMUST00000184367 102 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Gm3785-201ENSMUST00000221000 202 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col6a6Q8C6K9 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm22952-201ENSMUST00000116720 120 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm12685-201ENSMUST00000121702 214 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm25057-201ENSMUST00000157366 88 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm24303-201ENSMUST00000178237 126 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 LOC665443-201ENSMUST00000212284 796 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm7768-201ENSMUST00000222988 597 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm25682-201ENSMUST00000083942 164 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm37570-201ENSMUST00000195411 3106 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col6a6Q8C6K9 AC122881.1-201ENSMUST00000225757 2695 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm14294-201ENSMUST00000119749 751 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm11481-201ENSMUST00000120069 255 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm18348-201ENSMUST00000191227 820 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm29778-201ENSMUST00000201667 466 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm44863-201ENSMUST00000207613 1422 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Gm37633-201ENSMUST00000192858 2700 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 AC165260.6-204ENSMUST00000225571 3508 ntBASIC5.65□□□□□ -1.51
Col6a6Q8C6K9 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm15237-201ENSMUST00000122104 469 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm25603-201ENSMUST00000158361 105 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Mir3080-201ENSMUST00000175010 79 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm6477-201ENSMUST00000217098 764 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms