Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm25962-201ENSMUST00000157173 168 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm25342-201ENSMUST00000157459 122 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm23894-201ENSMUST00000158107 313 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm10410-201ENSMUST00000180138 384 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm26898-201ENSMUST00000181678 384 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm28439-201ENSMUST00000187714 876 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm6074-201ENSMUST00000193340 451 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm44075-201ENSMUST00000204208 216 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm2996-201ENSMUST00000211398 537 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm17872-201ENSMUST00000222550 532 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm22005-201ENSMUST00000082795 141 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Ap5m1-208ENSMUST00000228238 3514 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm7108-201ENSMUST00000118038 3407 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm13338-201ENSMUST00000120235 361 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm12140-201ENSMUST00000121214 544 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm15502-201ENSMUST00000121449 208 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm14363-201ENSMUST00000122304 409 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm26162-201ENSMUST00000157793 132 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm23343-201ENSMUST00000158964 143 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm10177-201ENSMUST00000160052 444 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm43436-201ENSMUST00000199308 147 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm44237-201ENSMUST00000205183 936 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm44538-201ENSMUST00000205615 348 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm5418-201ENSMUST00000206932 528 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm9535-201ENSMUST00000218499 768 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm7413-201ENSMUST00000219498 462 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms