Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
AtmQ62388 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Mir6899-201ENSMUST00000184798 64 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.74□□□□□ -1.49
AtmQ62388 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.74□□□□□ -1.49
AtmQ62388 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC5.74□□□□□ -1.49
AtmQ62388 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AtmQ62388 Gm23514-201ENSMUST00000082827 130 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
AtmQ62388 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC5.74□□□□□ -1.49
AtmQ62388 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gm14563-201ENSMUST00000120571 354 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gm6541-201ENSMUST00000165542 561 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Mir6539-201ENSMUST00000183732 110 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.74□□□□□ -1.49
AtmQ62388 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AtmQ62388 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
AtmQ62388 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
AtmQ62388 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
AtmQ62388 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AtmQ62388 Gm25057-201ENSMUST00000157366 88 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Gm20545-201ENSMUST00000174739 210 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
AtmQ62388 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
AtmQ62388 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
AtmQ62388 AC135119.1-202ENSMUST00000228435 2203 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Gm12040-201ENSMUST00000118357 537 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Gm23233-201ENSMUST00000157301 137 ntBASIC5.73□□□□□ -1.49
AtmQ62388 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.73□□□□□ -1.49
AtmQ62388 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.73□□□□□ -1.49
AtmQ62388 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.73□□□□□ -1.49
AtmQ62388 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.73□□□□□ -1.49
AtmQ62388 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Gm43014-201ENSMUST00000198568 2443 ntBASIC5.73□□□□□ -1.49
AtmQ62388 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC5.73□□□□□ -1.49
AtmQ62388 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
AtmQ62388 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
AtmQ62388 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
AtmQ62388 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms