Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Msx2Q03358 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.75□□□□□ -1.33
Msx2Q03358 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.75□□□□□ -1.33
Msx2Q03358 CT571256.1-201ENSMUST00000226045 585 ntBASIC6.75□□□□□ -1.33
Msx2Q03358 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Msx2Q03358 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msx2Q03358 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msx2Q03358 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.75□□□□□ -1.33
Msx2Q03358 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msx2Q03358 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msx2Q03358 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Msx2Q03358 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.75□□□□□ -1.33
Msx2Q03358 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.75□□□□□ -1.33
Msx2Q03358 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msx2Q03358 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.75□□□□□ -1.33
Msx2Q03358 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msx2Q03358 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msx2Q03358 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Msx2Q03358 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msx2Q03358 AC159188.2-201ENSMUST00000224103 1301 ntBASIC6.75□□□□□ -1.33
Msx2Q03358 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.74□□□□□ -1.33
Msx2Q03358 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msx2Q03358 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm13878-201ENSMUST00000117986 577 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm15233-201ENSMUST00000118747 400 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm15484-201ENSMUST00000118871 828 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm15923-201ENSMUST00000119300 1169 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm13080-201ENSMUST00000120556 420 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm13940-201ENSMUST00000121023 301 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm11910-201ENSMUST00000121624 432 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm14830-201ENSMUST00000121899 700 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.74□□□□□ -1.33
Msx2Q03358 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm24198-201ENSMUST00000157812 108 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm25120-201ENSMUST00000180148 79 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm21181-201ENSMUST00000186249 330 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm20587-201ENSMUST00000186367 1186 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm28803-201ENSMUST00000190385 764 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm37581-201ENSMUST00000192371 988 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm17997-201ENSMUST00000211801 840 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm8290-201ENSMUST00000218202 477 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Gm8137-201ENSMUST00000218997 463 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm18960-201ENSMUST00000222962 713 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msx2Q03358 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msx2Q03358 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.74□□□□□ -1.33
Msx2Q03358 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msx2Q03358 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Msx2Q03358 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.74□□□□□ -1.33
Msx2Q03358 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Msx2Q03358 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Msx2Q03358 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Msx2Q03358 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms