Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Fdft1P53798 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.25□□□□□ -1.41
Fdft1P53798 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Fdft1P53798 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Fdft1P53798 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.25□□□□□ -1.41
Fdft1P53798 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Fdft1P53798 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.25□□□□□ -1.41
Fdft1P53798 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Fdft1P53798 Robo2-210ENSMUST00000226478 8059 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Fdft1P53798 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Fdft1P53798 Gm14356-201ENSMUST00000118322 869 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm8855-201ENSMUST00000118888 878 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.24□□□□□ -1.41
Fdft1P53798 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.24□□□□□ -1.41
Fdft1P53798 Gm37770-201ENSMUST00000192855 772 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm22711-202ENSMUST00000197029 135 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm44856-201ENSMUST00000206639 304 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm18628-201ENSMUST00000220584 475 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm19340-201ENSMUST00000221995 345 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Gm29486-201ENSMUST00000088648 372 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Fdft1P53798 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Fdft1P53798 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Fdft1P53798 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Fdft1P53798 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
Fdft1P53798 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Fdft1P53798 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.24□□□□□ -1.41
Fdft1P53798 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Fdft1P53798 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Fdft1P53798 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Fdft1P53798 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Fdft1P53798 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Fdft1P53798 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm22267-201ENSMUST00000104008 131 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm15016-201ENSMUST00000117300 720 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm13740-201ENSMUST00000120590 310 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm14489-201ENSMUST00000120868 901 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm12101-201ENSMUST00000121590 390 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm22276-201ENSMUST00000122469 129 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm11962-201ENSMUST00000145746 255 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm26509-201ENSMUST00000180947 948 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm27853-201ENSMUST00000184176 250 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm38291-201ENSMUST00000193671 259 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm7804-202ENSMUST00000194187 854 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm37883-201ENSMUST00000194970 725 ntBASIC6.23□□□□□ -1.41
Fdft1P53798 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.23□□□□□ -1.41
Fdft1P53798 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.23□□□□□ -1.41
Fdft1P53798 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms