Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox3P53784 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.13□□□□□ -1.43
Sox3P53784 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox3P53784 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Sox3P53784 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Sox3P53784 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox3P53784 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Gm25363-201ENSMUST00000158850 245 ntBASIC6.12□□□□□ -1.43
Sox3P53784 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.12□□□□□ -1.43
Sox3P53784 Gm17217-201ENSMUST00000166613 469 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm20549-201ENSMUST00000174804 429 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm4956-202ENSMUST00000178869 672 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.12□□□□□ -1.43
Sox3P53784 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.12□□□□□ -1.43
Sox3P53784 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Gm5886-202ENSMUST00000203957 522 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.12□□□□□ -1.43
Sox3P53784 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox3P53784 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Gm24695-201ENSMUST00000083877 83 ntBASIC6.12□□□□□ -1.43
Sox3P53784 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox3P53784 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Sox3P53784 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sox3P53784 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.11□□□□□ -1.43
Sox3P53784 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
Sox3P53784 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox3P53784 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox3P53784 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Mir708-201ENSMUST00000102189 109 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm13890-201ENSMUST00000117578 390 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox3P53784 Gm11318-201ENSMUST00000118640 961 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm12901-201ENSMUST00000118690 532 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm14805-201ENSMUST00000120172 340 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.11□□□□□ -1.43
Sox3P53784 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.11□□□□□ -1.43
Sox3P53784 Mir1960-201ENSMUST00000157488 78 ntBASIC6.11□□□□□ -1.43
Sox3P53784 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms