Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.45□□□□□ -1.22
Traf1P39428 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Gm25117-201ENSMUST00000157194 144 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm26037-201ENSMUST00000158150 311 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm23386-201ENSMUST00000158585 144 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Traf1P39428 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Gm28443-201ENSMUST00000189081 698 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Gm37966-201ENSMUST00000193122 326 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Traf1P39428 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm15732-201ENSMUST00000079794 480 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Traf1P39428 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Traf1P39428 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Gm43180-201ENSMUST00000197541 2886 ntBASIC7.45□□□□□ -1.22
Traf1P39428 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Traf1P39428 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Traf1P39428 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Traf1P39428 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Gm26289-201ENSMUST00000104169 131 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Gm11256-201ENSMUST00000118109 829 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Gm13455-201ENSMUST00000118767 517 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Gm16511-201ENSMUST00000120019 564 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Gm7212-201ENSMUST00000120817 348 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Gm15618-201ENSMUST00000121610 452 ntBASIC7.44□□□□□ -1.22
Traf1P39428 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm25387-201ENSMUST00000157813 132 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Traf1P39428 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Traf1P39428 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.44□□□□□ -1.22
Traf1P39428 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Cma2-202ENSMUST00000228263 857 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.44□□□□□ -1.22
Traf1P39428 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Traf1P39428 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Traf1P39428 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm14667-201ENSMUST00000119448 1350 ntBASIC7.44□□□□□ -1.22
Traf1P39428 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Traf1P39428 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Traf1P39428 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Traf1P39428 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Mir678-201ENSMUST00000102114 84 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Traf1P39428 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Traf1P39428 Gm24989-201ENSMUST00000104461 88 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms