Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Gm19233-201ENSMUST00000219772 936 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Gm19340-201ENSMUST00000221995 345 ntBASIC7.04□□□□□ -1.28
Usp4P35123 CT009527.2-201ENSMUST00000225386 606 ntBASIC7.04□□□□□ -1.28
Usp4P35123 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.04□□□□□ -1.28
Usp4P35123 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp4P35123 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
Usp4P35123 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp4P35123 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Usp4P35123 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Usp4P35123 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp4P35123 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp4P35123 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp4P35123 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm11858-201ENSMUST00000117935 838 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm13156-201ENSMUST00000118348 321 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm8534-201ENSMUST00000118553 766 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm12577-201ENSMUST00000119701 574 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm11498-201ENSMUST00000120660 949 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.03□□□□□ -1.28
Usp4P35123 Gm22636-201ENSMUST00000158142 275 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Gm17061-201ENSMUST00000163167 499 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.03□□□□□ -1.28
Usp4P35123 V1rg10-201ENSMUST00000183378 937 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm27817-201ENSMUST00000184302 233 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Gm37866-201ENSMUST00000191950 696 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Gm37493-201ENSMUST00000193167 433 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC7.03□□□□□ -1.28
Usp4P35123 Gm6366-201ENSMUST00000198766 826 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Trav12-4-201ENSMUST00000200663 271 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.03□□□□□ -1.28
Usp4P35123 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.03□□□□□ -1.28
Usp4P35123 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.03□□□□□ -1.28
Usp4P35123 AC130673.2-201ENSMUST00000228091 797 ntBASIC7.03□□□□□ -1.28
Usp4P35123 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Gm24035-201ENSMUST00000082867 107 ntBASIC7.03□□□□□ -1.28
Usp4P35123 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp4P35123 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.03□□□□□ -1.28
Usp4P35123 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Usp4P35123 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp4P35123 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.03□□□□□ -1.28
Usp4P35123 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp4P35123 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Usp4P35123 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Usp4P35123 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.02□□□□□ -1.29
Usp4P35123 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Usp4P35123 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Usp4P35123 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Usp4P35123 Gm25311-201ENSMUST00000104136 132 ntBASIC7.02□□□□□ -1.29
Usp4P35123 Gm13222-201ENSMUST00000119638 138 ntBASIC7.02□□□□□ -1.29
Usp4P35123 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.02□□□□□ -1.29
Usp4P35123 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.02□□□□□ -1.29
Usp4P35123 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms