Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col1a1P11087 Mir143-201ENSMUST00000083511 63 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.35□□□□□ -1.23
Col1a1P11087 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col1a1P11087 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.35□□□□□ -1.23
Col1a1P11087 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col1a1P11087 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.34□□□□□ -1.23
Col1a1P11087 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col1a1P11087 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.34□□□□□ -1.23
Col1a1P11087 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC7.34□□□□□ -1.23
Col1a1P11087 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm12874-201ENSMUST00000117190 913 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC7.34□□□□□ -1.23
Col1a1P11087 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC7.34□□□□□ -1.23
Col1a1P11087 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm24081-201ENSMUST00000175177 125 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm28353-201ENSMUST00000186482 570 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Gm28533-201ENSMUST00000186741 570 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.34□□□□□ -1.23
Col1a1P11087 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.34□□□□□ -1.23
Col1a1P11087 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC7.34□□□□□ -1.23
Col1a1P11087 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Gm7557-201ENSMUST00000221935 865 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Mir331-201ENSMUST00000083673 96 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Gm37221-201ENSMUST00000194472 3007 ntBASIC7.34□□□□□ -1.23
Col1a1P11087 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col1a1P11087 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col1a1P11087 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Col1a1P11087 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Col1a1P11087 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Col1a1P11087 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm12482-201ENSMUST00000120435 630 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Gm14970-201ENSMUST00000122289 355 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm23149-201ENSMUST00000158837 230 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm5418-201ENSMUST00000206932 528 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm18996-201ENSMUST00000214851 755 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Col1a1P11087 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 n-R5s204-201ENSMUST00000082972 119 ntBASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.33□□□□□ -1.24
Col1a1P11087 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col1a1P11087 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms