Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.12
Hoxc9P09633 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.12
Hoxc9P09633 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm23149-201ENSMUST00000158837 230 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm16139-201ENSMUST00000160015 420 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxc9P09633 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm6290-201ENSMUST00000207666 1158 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm9269-201ENSMUST00000221661 578 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 AC129537.1-201ENSMUST00000226596 1228 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm16335-201ENSMUST00000077495 309 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm23456-201ENSMUST00000083335 137 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Mir143-201ENSMUST00000083511 63 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm44750-201ENSMUST00000206185 2223 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm37238-201ENSMUST00000195552 2390 ntBASIC8.08□□□□□ -1.12
Hoxc9P09633 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxc9P09633 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxc9P09633 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxc9P09633 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm14510-201ENSMUST00000116165 1092 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm13430-201ENSMUST00000121366 288 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm25116-201ENSMUST00000157191 122 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Igkv4-75-201ENSMUST00000197204 359 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm44837-201ENSMUST00000206863 717 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC8.07□□□□□ -1.12
Hoxc9P09633 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm18413-201ENSMUST00000221573 655 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hoxc9P09633 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm2531-201ENSMUST00000075609 512 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Mir375-201ENSMUST00000083682 64 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm18880-201ENSMUST00000223333 1541 ntBASIC8.07□□□□□ -1.12
Hoxc9P09633 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Hoxc9P09633 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Hoxc9P09633 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxc9P09633 Gm44046-201ENSMUST00000203145 2678 ntBASIC8.06□□□□□ -1.12
Hoxc9P09633 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxc9P09633 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxc9P09633 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.06□□□□□ -1.12
Hoxc9P09633 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.06□□□□□ -1.12
Hoxc9P09633 AC139941.2-201ENSMUST00000221565 1824 ntBASIC8.06□□□□□ -1.12
Hoxc9P09633 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Hoxc9P09633 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxc9P09633 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxc9P09633 Mir449c-201ENSMUST00000102192 109 ntBASIC8.06□□□□□ -1.12
Hoxc9P09633 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Hoxc9P09633 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Hoxc9P09633 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hoxc9P09633 Gm14716-201ENSMUST00000120138 718 ntBASIC8.06□□□□□ -1.12
Hoxc9P09633 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms