Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Srp54bE9PXC0 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm26289-201ENSMUST00000104169 131 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm9836-201ENSMUST00000117132 216 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm13137-201ENSMUST00000118035 345 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm6446-201ENSMUST00000120604 818 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm26410-201ENSMUST00000157670 261 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm23894-201ENSMUST00000158107 313 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm26381-201ENSMUST00000174895 92 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm27853-201ENSMUST00000184176 250 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm19739-201ENSMUST00000195941 153 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm45485-201ENSMUST00000211229 357 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm6991-201ENSMUST00000218475 1178 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm15732-201ENSMUST00000079794 480 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Olfr519-201ENSMUST00000084752 960 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Srp54bE9PXC0 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm15616-201ENSMUST00000118662 375 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm18833-201ENSMUST00000173218 862 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm9529-201ENSMUST00000177598 579 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Mir7072-201ENSMUST00000184542 60 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm3351-201ENSMUST00000193454 505 ntBASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Srp54bE9PXC0 Gm43160-201ENSMUST00000196453 421 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms