Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Gm24621-201ENSMUST00000082679 140 ntBASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.24□□□□□ -1.41
Lrif1Q8CDD9 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm15149-201ENSMUST00000119370 360 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm11617-201ENSMUST00000119609 639 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm12504-202ENSMUST00000148026 306 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm25435-201ENSMUST00000158277 267 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm20432-201ENSMUST00000173716 250 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm26509-201ENSMUST00000180947 948 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm17834-201ENSMUST00000204322 891 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lrif1Q8CDD9 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Pramel-201ENSMUST00000118979 1383 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm23748-201ENSMUST00000104227 131 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm14382-201ENSMUST00000117374 437 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm12713-201ENSMUST00000118404 764 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm12135-201ENSMUST00000119170 466 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm22701-201ENSMUST00000175371 291 ntBASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lrif1Q8CDD9 Gm10136-201ENSMUST00000183196 435 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms