Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Vps53Q8CCB4 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.55□□□□□ -1.2
Vps53Q8CCB4 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm23311-201ENSMUST00000104152 134 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm14938-201ENSMUST00000119482 943 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm6027-201ENSMUST00000121467 756 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm5125-201ENSMUST00000148614 624 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm22518-201ENSMUST00000158267 68 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm27295-201ENSMUST00000184264 153 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm29036-201ENSMUST00000189967 877 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm29755-201ENSMUST00000196976 948 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm43894-201ENSMUST00000203274 688 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm20177-201ENSMUST00000203705 334 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm19885-201ENSMUST00000212853 343 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm19116-201ENSMUST00000218592 642 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Vps53Q8CCB4 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm11799-201ENSMUST00000116110 460 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm14018-201ENSMUST00000119042 455 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm14580-201ENSMUST00000119122 718 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm12135-201ENSMUST00000119170 466 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm12244-201ENSMUST00000119500 291 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm11498-201ENSMUST00000120660 949 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm23674-201ENSMUST00000157473 131 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm24343-201ENSMUST00000158708 111 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm20691-201ENSMUST00000176889 333 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm28023-201ENSMUST00000184556 60 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm27825-201ENSMUST00000184586 60 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm27970-201ENSMUST00000184854 407 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm36943-201ENSMUST00000194422 282 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm5694-201ENSMUST00000195648 641 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm43116-201ENSMUST00000199789 195 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Gm19340-201ENSMUST00000221995 345 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Vps53Q8CCB4 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms