Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Osbpl3-203ENSMUST00000114466 2916 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Dpy19l4-201ENSMUST00000084892 6754 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm44937-201ENSMUST00000207705 2691 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Pus7-206ENSMUST00000148618 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 1700034J05Rik-201ENSMUST00000036592 3007 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Tnpo3-202ENSMUST00000115251 3989 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Smok3b-202ENSMUST00000166206 2160 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Pxylp1-202ENSMUST00000112951 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm25679-201ENSMUST00000101973 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm24121-201ENSMUST00000102029 106 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm9095-201ENSMUST00000117607 881 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm11787-201ENSMUST00000121996 1050 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm22987-201ENSMUST00000122757 246 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm3261-201ENSMUST00000166886 481 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm18833-201ENSMUST00000173218 862 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm22634-201ENSMUST00000177653 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm26444-201ENSMUST00000178333 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm22317-201ENSMUST00000178469 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm24305-201ENSMUST00000179155 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm22513-201ENSMUST00000179621 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm23804-201ENSMUST00000179675 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm26180-201ENSMUST00000179942 107 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm17780-201ENSMUST00000207142 612 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm19005-201ENSMUST00000218890 865 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm46188-201ENSMUST00000219927 462 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm5194-201ENSMUST00000221457 742 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 CU074400.1-201ENSMUST00000224411 220 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 AC107369.2-201ENSMUST00000226154 916 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 AC155237.2-201ENSMUST00000228487 478 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim35Q8C006 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm22068-201ENSMUST00000082761 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm23447-201ENSMUST00000082798 163 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm22704-201ENSMUST00000083027 137 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm22054-201ENSMUST00000083395 155 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Rnu1a1-201ENSMUST00000093684 164 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm43111-201ENSMUST00000197445 1919 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm34821-202ENSMUST00000209114 1949 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Depdc5-201ENSMUST00000049780 3569 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Npr3-204ENSMUST00000228489 1969 ntBASIC9.22□□□□□ -0.93
Trim35Q8C006 Btbd7-201ENSMUST00000045652 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm10629-201ENSMUST00000137706 2014 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm14377-201ENSMUST00000207045 2094 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Lpar1-202ENSMUST00000107570 3244 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gabrb2-201ENSMUST00000007797 3989 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim35Q8C006 Gm8276-201ENSMUST00000192231 1812 ntBASIC9.21□□□□□ -0.93
Trim35Q8C006 Zic3-203ENSMUST00000088631 2980 ntTSL 5 BASIC9.21□□□□□ -0.93
Trim35Q8C006 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 Gm43718-201ENSMUST00000197524 1857 ntBASIC9.21□□□□□ -0.93
Trim35Q8C006 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC9.21□□□□□ -0.93
Trim35Q8C006 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 AC154377.1-201ENSMUST00000226752 4979 ntBASIC9.21□□□□□ -0.93
Trim35Q8C006 Cyld-210ENSMUST00000211554 4638 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 Mboat2-202ENSMUST00000110942 2351 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 AC121860.1-201ENSMUST00000227908 2787 ntBASIC9.21□□□□□ -0.93
Trim35Q8C006 Gm36401-201ENSMUST00000194255 2028 ntBASIC9.21□□□□□ -0.93
Trim35Q8C006 Ssb-201ENSMUST00000090852 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Trim35Q8C006 Tmem167b-201ENSMUST00000090546 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 Tll2-202ENSMUST00000169941 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim35Q8C006 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC9.21□□□□□ -0.93
Trim35Q8C006 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm24432-201ENSMUST00000104075 126 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Rpl9-ps3-201ENSMUST00000119147 576 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 H3f3a-ps2-201ENSMUST00000119544 411 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm12538-201ENSMUST00000120064 486 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm11537-201ENSMUST00000124865 791 ntTSL 3 BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm13049-201ENSMUST00000133196 757 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Gm25669-201ENSMUST00000157699 112 ntBASIC9.21□□□□□ -0.94
Trim35Q8C006 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim35Q8C006 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms