Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm7626-201ENSMUST00000195801 353 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm43157-201ENSMUST00000198223 412 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm44163-201ENSMUST00000205140 475 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 AC154730.1-201ENSMUST00000227874 816 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.08□□□□□ -1.28
Usp49Q6P9L4 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Usp49Q6P9L4 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm11472-201ENSMUST00000121305 556 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm23674-201ENSMUST00000157473 131 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm22588-201ENSMUST00000157510 140 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Trbv9-201ENSMUST00000194494 290 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm18805-201ENSMUST00000206872 655 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm18620-201ENSMUST00000222295 324 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm15500-201ENSMUST00000071523 894 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Usp49Q6P9L4 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm8250-201ENSMUST00000117398 774 ntBASIC7.06□□□□□ -1.28
Usp49Q6P9L4 Gm15164-201ENSMUST00000122203 271 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms