Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm8728-201ENSMUST00000207367 2178 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm8486-201ENSMUST00000207508 2171 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm8685-201ENSMUST00000207567 2183 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm16443-201ENSMUST00000207909 2184 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm37234-201ENSMUST00000193259 1441 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm18194-202ENSMUST00000210952 3442 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm28429-201ENSMUST00000188521 363 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm18100-201ENSMUST00000200897 452 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm19900-201ENSMUST00000207285 576 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Supt4b-201ENSMUST00000214434 351 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Spg11Q3UHA3 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm14294-201ENSMUST00000119749 751 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Mir3104-201ENSMUST00000174911 63 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm22367-201ENSMUST00000178930 132 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm18969-201ENSMUST00000189423 730 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm28640-201ENSMUST00000190918 550 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm43467-201ENSMUST00000197441 437 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm45777-201ENSMUST00000213009 301 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm15016-201ENSMUST00000117300 720 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm13491-201ENSMUST00000118267 235 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm5387-201ENSMUST00000119776 857 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm23224-201ENSMUST00000158122 271 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm29197-201ENSMUST00000185922 702 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm38670-201ENSMUST00000199248 77 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm10095-201ENSMUST00000222765 483 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm42771-201ENSMUST00000198342 2486 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Spg11Q3UHA3 Malat1-201ENSMUST00000172812 6983 ntBASIC5.87□□□□□ -1.47
Spg11Q3UHA3 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC5.86□□□□□ -1.47
Spg11Q3UHA3 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Spg11Q3UHA3 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Spg11Q3UHA3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Spg11Q3UHA3 Gm36527-201ENSMUST00000195500 3029 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms