Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PrkdcP97313 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Gm9788-201ENSMUST00000057038 906 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PrkdcP97313 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PrkdcP97313 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm25224-201ENSMUST00000158195 68 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PrkdcP97313 Gm22807-201ENSMUST00000082737 129 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Mir133b-201ENSMUST00000083546 119 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 AC140280.1-201ENSMUST00000227826 1847 ntBASIC4.17□□□□□ -1.74
PrkdcP97313 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PrkdcP97313 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC4.17□□□□□ -1.74
PrkdcP97313 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm42894-201ENSMUST00000200788 3390 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm11561-201ENSMUST00000117429 417 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm15158-201ENSMUST00000120577 570 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm25057-201ENSMUST00000157366 88 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm3242-201ENSMUST00000171273 485 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm7887-201ENSMUST00000056948 537 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm42490-201ENSMUST00000198595 2064 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm37132-201ENSMUST00000195553 2238 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Abca8a-204ENSMUST00000106664 5617 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 AC167013.5-201ENSMUST00000227597 2947 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm45457-201ENSMUST00000209931 3089 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PrkdcP97313 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm22273-201ENSMUST00000104040 132 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm15741-201ENSMUST00000119401 754 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm11498-201ENSMUST00000120660 949 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.16□□□□□ -1.74
PrkdcP97313 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.16□□□□□ -1.74
PrkdcP97313 Gm8454-201ENSMUST00000196980 811 ntBASIC4.16□□□□□ -1.74
PrkdcP97313 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms