Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lsm6P62313 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.57□□□□□ -1.52
Lsm6P62313 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lsm6P62313 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lsm6P62313 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.57□□□□□ -1.52
Lsm6P62313 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Lsm6P62313 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC5.57□□□□□ -1.52
Lsm6P62313 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lsm6P62313 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lsm6P62313 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lsm6P62313 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.57□□□□□ -1.52
Lsm6P62313 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Lsm6P62313 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm25877-201ENSMUST00000104326 129 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm8855-201ENSMUST00000118888 878 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm12115-201ENSMUST00000119969 447 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm12804-201ENSMUST00000121030 999 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm11925-201ENSMUST00000121375 535 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.56□□□□□ -1.52
Lsm6P62313 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm43157-201ENSMUST00000198223 412 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm7769-201ENSMUST00000212900 933 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.56□□□□□ -1.52
Lsm6P62313 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lsm6P62313 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lsm6P62313 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.56□□□□□ -1.52
Lsm6P62313 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lsm6P62313 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lsm6P62313 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm6P62313 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm6P62313 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm6P62313 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm22267-201ENSMUST00000104008 131 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Gm23979-201ENSMUST00000104071 128 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lsm6P62313 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm22214-201ENSMUST00000157563 172 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Gm22604-201ENSMUST00000157604 311 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.55□□□□□ -1.52
Lsm6P62313 Gm37966-201ENSMUST00000193122 326 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Gm20128-201ENSMUST00000196189 417 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.55□□□□□ -1.52
Lsm6P62313 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms