Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Msh6P54276 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Msh6P54276 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Msh6P54276 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC8.06□□□□□ -1.12
Msh6P54276 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.06□□□□□ -1.12
Msh6P54276 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.05□□□□□ -1.12
Msh6P54276 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Msh6P54276 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Msh6P54276 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Msh6P54276 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm16074-201ENSMUST00000119524 444 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm16139-201ENSMUST00000160015 420 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Msh6P54276 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC8.05□□□□□ -1.12
Msh6P54276 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm37103-201ENSMUST00000191830 115 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Gm5990-201ENSMUST00000203126 746 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC8.05□□□□□ -1.12
Msh6P54276 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Msh6P54276 AC159006.2-201ENSMUST00000228734 4144 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC8.05□□□□□ -1.12
Msh6P54276 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Msh6P54276 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Msh6P54276 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
Msh6P54276 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Msh6P54276 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.04□□□□□ -1.12
Msh6P54276 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Msh6P54276 Gm45290-201ENSMUST00000211177 3890 ntBASIC8.04□□□□□ -1.12
Msh6P54276 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Gm12901-201ENSMUST00000118690 532 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Msh6P54276 Gm7700-201ENSMUST00000120273 970 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Gm12399-201ENSMUST00000121475 446 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Gm12396-201ENSMUST00000121600 306 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Gm22724-201ENSMUST00000158091 127 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Gm25445-201ENSMUST00000158996 299 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Mir3572-201ENSMUST00000175549 86 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Msh6P54276 Gm20770-201ENSMUST00000193474 694 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Gm43105-201ENSMUST00000202987 459 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Gm6290-201ENSMUST00000207666 1158 ntBASIC8.04□□□□□ -1.12
Msh6P54276 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.04□□□□□ -1.12
Msh6P54276 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Msh6P54276 AC133650.1-201ENSMUST00000217243 578 ntBASIC8.04□□□□□ -1.12
Msh6P54276 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
Msh6P54276 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Msh6P54276 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Msh6P54276 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Msh6P54276 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Msh6P54276 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.04□□□□□ -1.12
Msh6P54276 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.12
Msh6P54276 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Msh6P54276 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Msh6P54276 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Msh6P54276 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Msh6P54276 Gm18310-201ENSMUST00000206494 3912 ntBASIC8.03□□□□□ -1.12
Msh6P54276 AC122305.1-201ENSMUST00000214803 3921 ntBASIC8.03□□□□□ -1.12
Msh6P54276 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Msh6P54276 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.03□□□□□ -1.12
Msh6P54276 Thap6-201ENSMUST00000191860 3151 ntBASIC8.03□□□□□ -1.12
Msh6P54276 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC8.03□□□□□ -1.12
Msh6P54276 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Msh6P54276 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Msh6P54276 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Msh6P54276 Gm42507-201ENSMUST00000201187 2555 ntBASIC8.03□□□□□ -1.12
Msh6P54276 Gm20486-201ENSMUST00000101544 128 ntBASIC8.03□□□□□ -1.12
Msh6P54276 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Msh6P54276 Gm13013-201ENSMUST00000119087 523 ntBASIC8.03□□□□□ -1.12
Msh6P54276 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Msh6P54276 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Msh6P54276 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms