Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Gm4956-202ENSMUST00000178869 672 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Igkv3-8-201ENSMUST00000197635 339 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Gm44961-201ENSMUST00000207450 196 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Sox1P53783 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Gm17997-201ENSMUST00000211801 840 ntBASIC7.38□□□□□ -1.23
Sox1P53783 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 AL929417.1-201ENSMUST00000214901 124 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.38□□□□□ -1.23
Sox1P53783 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Sox1P53783 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Sox1P53783 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Sox1P53783 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Sox1P53783 Gm37978-201ENSMUST00000194736 2915 ntBASIC7.38□□□□□ -1.23
Sox1P53783 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Sox1P53783 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Sox1P53783 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.37□□□□□ -1.23
Sox1P53783 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Sox1P53783 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Gm19176-201ENSMUST00000222149 1831 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm12842-201ENSMUST00000117298 476 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm12959-201ENSMUST00000119396 403 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm16511-201ENSMUST00000120019 564 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm14360-201ENSMUST00000120670 393 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Mup-ps4-201ENSMUST00000151005 539 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm25219-201ENSMUST00000157545 330 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm26393-201ENSMUST00000157625 129 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm23034-201ENSMUST00000158001 147 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.37□□□□□ -1.23
Sox1P53783 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm24756-201ENSMUST00000177002 96 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm27601-201ENSMUST00000184794 127 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm43215-201ENSMUST00000199108 252 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm43487-201ENSMUST00000200331 1031 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm43850-201ENSMUST00000202021 578 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm42673-201ENSMUST00000202676 337 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm18215-201ENSMUST00000204429 798 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Sox1P53783 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC7.37□□□□□ -1.23
Sox1P53783 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Sox1P53783 AC126554.4-201ENSMUST00000221055 409 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Sox1P53783 AC115735.3-201ENSMUST00000227757 513 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Sox1P53783 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 n-R5s196-201ENSMUST00000083136 117 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm5386-201ENSMUST00000121749 2450 ntBASIC7.37□□□□□ -1.23
Sox1P53783 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.37□□□□□ -1.23
Sox1P53783 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Sox1P53783 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.37□□□□□ -1.23
Sox1P53783 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms