Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm12193-201ENSMUST00000117250 379 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm15901-201ENSMUST00000117663 941 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm15332-201ENSMUST00000118386 357 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm6382-201ENSMUST00000118873 942 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm8855-201ENSMUST00000118888 878 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.09□□□□□ -1.43
Cdx2P43241 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm37609-201ENSMUST00000191778 678 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm38131-201ENSMUST00000192449 430 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm43105-201ENSMUST00000202987 459 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm44251-201ENSMUST00000204963 442 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm45185-201ENSMUST00000207556 404 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm10688-201ENSMUST00000214985 520 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx2P43241 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm5080-201ENSMUST00000220341 743 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx2P43241 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm23456-201ENSMUST00000083335 137 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdx2P43241 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdx2P43241 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx2P43241 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Cdx2P43241 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.09□□□□□ -1.43
Cdx2P43241 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Cdx2P43241 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.09□□□□□ -1.43
Cdx2P43241 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdx2P43241 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdx2P43241 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Cdx2P43241 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx2P43241 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.09□□□□□ -1.44
Cdx2P43241 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx2P43241 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdx2P43241 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Cdx2P43241 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm20486-201ENSMUST00000101544 128 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm14173-201ENSMUST00000117690 278 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm15616-201ENSMUST00000118662 375 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm7700-201ENSMUST00000120273 970 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm15237-201ENSMUST00000122104 469 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm25363-201ENSMUST00000158850 245 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm16139-201ENSMUST00000160015 420 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdx2P43241 Mir6367-201ENSMUST00000183385 102 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdx2P43241 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm43160-201ENSMUST00000196453 421 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm4742-201ENSMUST00000200261 771 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm9088-201ENSMUST00000220237 508 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdx2P43241 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdx2P43241 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx2P43241 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.08□□□□□ -1.44
Cdx2P43241 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx2P43241 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.08□□□□□ -1.44
Cdx2P43241 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms