Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Col18a1P39061 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC8.44□□□□□ -1.06
Col18a1P39061 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm13811-201ENSMUST00000117800 256 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Gm12317-201ENSMUST00000122307 319 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Col18a1P39061 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC8.44□□□□□ -1.06
Col18a1P39061 Mir5103-201ENSMUST00000175111 79 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC8.44□□□□□ -1.06
Col18a1P39061 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC8.44□□□□□ -1.06
Col18a1P39061 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm6474-201ENSMUST00000223250 699 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Col18a1P39061 CT025667.1-201ENSMUST00000225872 382 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Gm22005-201ENSMUST00000082795 141 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.44□□□□□ -1.06
Col18a1P39061 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Col18a1P39061 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col18a1P39061 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Col18a1P39061 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Col18a1P39061 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm12287-201ENSMUST00000119770 707 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm6305-201ENSMUST00000121027 1012 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC8.43□□□□□ -1.06
Col18a1P39061 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm16147-201ENSMUST00000162143 373 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm18343-201ENSMUST00000172802 604 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm13147-202ENSMUST00000177526 1173 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm27845-201ENSMUST00000184479 114 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm37560-201ENSMUST00000194289 1000 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm43561-201ENSMUST00000199866 448 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm5229-201ENSMUST00000039375 354 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col18a1P39061 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm42975-201ENSMUST00000200612 1491 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm37880-201ENSMUST00000192216 3257 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col18a1P39061 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm22272-201ENSMUST00000104039 134 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm13604-201ENSMUST00000119332 482 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm14106-201ENSMUST00000119382 438 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm8454-201ENSMUST00000196980 811 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Gm43596-201ENSMUST00000202818 884 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 AC147101.1-201ENSMUST00000217964 312 ntBASIC8.43□□□□□ -1.06
Col18a1P39061 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col18a1P39061 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col18a1P39061 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col18a1P39061 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms