Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Foxa1P35582 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.81□□□□□ -1.48
Foxa1P35582 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.81□□□□□ -1.48
Foxa1P35582 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.81□□□□□ -1.48
Foxa1P35582 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Foxa1P35582 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Foxa1P35582 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.81□□□□□ -1.48
Foxa1P35582 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm12442-201ENSMUST00000118372 338 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm12451-201ENSMUST00000121636 633 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm26486-201ENSMUST00000158021 110 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm37135-201ENSMUST00000192652 534 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm38291-201ENSMUST00000193671 259 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm17824-201ENSMUST00000197690 805 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm44374-201ENSMUST00000199821 140 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm30708-201ENSMUST00000202183 312 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.8□□□□□ -1.48
Foxa1P35582 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Foxa1P35582 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.8□□□□□ -1.48
Foxa1P35582 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.8□□□□□ -1.48
Foxa1P35582 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.79□□□□□ -1.48
Foxa1P35582 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Foxa1P35582 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
Foxa1P35582 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Foxa1P35582 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm13183-201ENSMUST00000118615 789 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm14018-201ENSMUST00000119042 455 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 Gm14098-201ENSMUST00000119295 623 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm18700-201ENSMUST00000185791 553 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm37901-201ENSMUST00000195107 514 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.79□□□□□ -1.48
Foxa1P35582 Gm43772-201ENSMUST00000202052 379 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.79□□□□□ -1.48
Foxa1P35582 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Foxa1P35582 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms