Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm17790-201ENSMUST00000191545 1228 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxc11P31313 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm45789-201ENSMUST00000213038 364 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm18601-201ENSMUST00000220831 634 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 CT009764.1-201ENSMUST00000222260 483 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxc11P31313 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hoxc11P31313 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Hoxc11P31313 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.41□□□□□ -1.38
Hoxc11P31313 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hoxc11P31313 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxc11P31313 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxc11P31313 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxc11P31313 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxc11P31313 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxc11P31313 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.4□□□□□ -1.38
Hoxc11P31313 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxc11P31313 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm27152-201ENSMUST00000183828 99 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm18849-201ENSMUST00000189861 560 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm43316-201ENSMUST00000197252 1295 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm43576-201ENSMUST00000197937 871 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm6850-201ENSMUST00000210031 530 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxc11P31313 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm18789-201ENSMUST00000216115 550 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm18586-201ENSMUST00000217265 518 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxc11P31313 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.4□□□□□ -1.38
Hoxc11P31313 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxc11P31313 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.4□□□□□ -1.39
Hoxc11P31313 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxc11P31313 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxc11P31313 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxc11P31313 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.4□□□□□ -1.39
Hoxc11P31313 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hoxc11P31313 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.4□□□□□ -1.39
Hoxc11P31313 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.4□□□□□ -1.39
Hoxc11P31313 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxc11P31313 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.4□□□□□ -1.39
Hoxc11P31313 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxc11P31313 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxc11P31313 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxc11P31313 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxc11P31313 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxc11P31313 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hoxc11P31313 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxc11P31313 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Hoxc11P31313 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.39□□□□□ -1.39
Hoxc11P31313 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.39□□□□□ -1.39
Hoxc11P31313 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxc11P31313 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxc11P31313 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxc11P31313 Mir678-201ENSMUST00000102114 84 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms