Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.21□□□□□ -1.58
Col8a2P25318 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm15257-201ENSMUST00000177680 883 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm15252-201ENSMUST00000177750 883 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm15256-201ENSMUST00000177793 883 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm15260-201ENSMUST00000179402 883 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm7499-201ENSMUST00000210423 813 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm18789-201ENSMUST00000216115 550 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.21□□□□□ -1.58
Col8a2P25318 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col8a2P25318 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col8a2P25318 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Col8a2P25318 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Col8a2P25318 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col8a2P25318 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.21□□□□□ -1.58
Col8a2P25318 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm38697-201ENSMUST00000198061 1746 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col8a2P25318 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col8a2P25318 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.2□□□□□ -1.58
Col8a2P25318 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Col8a2P25318 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Mir678-201ENSMUST00000102114 84 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm22372-201ENSMUST00000104589 136 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm11198-201ENSMUST00000119771 974 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm5387-201ENSMUST00000119776 857 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm14712-201ENSMUST00000120195 772 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm24687-201ENSMUST00000157758 241 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm25374-201ENSMUST00000158158 101 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm10177-201ENSMUST00000160052 444 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm16269-201ENSMUST00000160532 409 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm43501-201ENSMUST00000202513 107 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col8a2P25318 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.2□□□□□ -1.58
Col8a2P25318 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm33312-201ENSMUST00000222443 332 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col8a2P25318 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col8a2P25318 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col8a2P25318 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm44797-201ENSMUST00000208780 1837 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Col8a2P25318 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.2□□□□□ -1.58
Col8a2P25318 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col8a2P25318 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms