Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
BdnfP21237 Gm23407-201ENSMUST00000082538 91 ntBASIC6.4□□□□□ -1.38
BdnfP21237 Gm23734-201ENSMUST00000083753 109 ntBASIC6.4□□□□□ -1.38
BdnfP21237 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
BdnfP21237 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.4□□□□□ -1.38
BdnfP21237 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BdnfP21237 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
BdnfP21237 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BdnfP21237 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.4□□□□□ -1.39
BdnfP21237 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
BdnfP21237 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.4□□□□□ -1.39
BdnfP21237 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
BdnfP21237 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC6.4□□□□□ -1.39
BdnfP21237 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BdnfP21237 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.4□□□□□ -1.39
BdnfP21237 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
BdnfP21237 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
BdnfP21237 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
BdnfP21237 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.4□□□□□ -1.39
BdnfP21237 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.4□□□□□ -1.39
BdnfP21237 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
BdnfP21237 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BdnfP21237 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Gm12306-201ENSMUST00000117256 171 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm8534-201ENSMUST00000118553 766 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm14631-201ENSMUST00000119067 594 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm14725-201ENSMUST00000120324 828 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm16357-201ENSMUST00000144091 474 ntBASIC6.39□□□□□ -1.39
BdnfP21237 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Gm27596-201ENSMUST00000185061 83 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm18728-201ENSMUST00000186155 753 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm29470-201ENSMUST00000188007 696 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm37493-201ENSMUST00000193167 433 ntBASIC6.39□□□□□ -1.39
BdnfP21237 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm5995-201ENSMUST00000204107 1273 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm5314-201ENSMUST00000204852 466 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm4796-201ENSMUST00000219802 624 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm19340-201ENSMUST00000221995 345 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BdnfP21237 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BdnfP21237 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
BdnfP21237 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
BdnfP21237 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.39□□□□□ -1.39
BdnfP21237 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
BdnfP21237 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BdnfP21237 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.38□□□□□ -1.39
BdnfP21237 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
BdnfP21237 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BdnfP21237 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
BdnfP21237 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
BdnfP21237 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
BdnfP21237 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
BdnfP21237 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.38□□□□□ -1.39
BdnfP21237 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
BdnfP21237 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
BdnfP21237 Gm25757-201ENSMUST00000103986 123 ntBASIC6.38□□□□□ -1.39
BdnfP21237 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms