Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm43664-201ENSMUST00000196038 734 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm43656-201ENSMUST00000197882 434 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm43558-201ENSMUST00000200155 210 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm44727-201ENSMUST00000204225 451 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm8035-201ENSMUST00000204625 687 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 AL935138.1-201ENSMUST00000215309 196 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 AC112972.1-201ENSMUST00000227329 365 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm24613-201ENSMUST00000083266 130 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.32□□□□□ -1.4
Pcdh1F7BJK1 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm25276-201ENSMUST00000104300 124 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm16383-201ENSMUST00000118122 232 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm15842-201ENSMUST00000120513 618 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm16458-201ENSMUST00000121428 502 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm11688-201ENSMUST00000122145 308 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm24211-201ENSMUST00000158264 107 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm20111-201ENSMUST00000184830 319 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm28507-201ENSMUST00000189737 703 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm37581-201ENSMUST00000192371 988 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm17952-201ENSMUST00000193914 747 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm37196-201ENSMUST00000194762 906 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm37883-201ENSMUST00000194970 725 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm17967-201ENSMUST00000195319 647 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm42580-201ENSMUST00000197223 753 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm18215-201ENSMUST00000204429 798 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 AL603630.1-201ENSMUST00000214781 147 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Gm18387-201ENSMUST00000220333 702 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.31□□□□□ -1.4
Pcdh1F7BJK1 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms