Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a3E9PWQ3 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm28413-201ENSMUST00000189369 291 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm13930-201ENSMUST00000118569 368 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm22916-201ENSMUST00000157616 119 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm23700-201ENSMUST00000158842 102 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm3257-201ENSMUST00000207217 675 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm18468-201ENSMUST00000207321 369 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm18470-201ENSMUST00000207467 420 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm18465-201ENSMUST00000207468 369 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm18464-201ENSMUST00000207803 420 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm18458-201ENSMUST00000207908 369 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm18461-201ENSMUST00000208421 420 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm12807-201ENSMUST00000121546 962 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm6070-201ENSMUST00000207275 419 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gm3912-203ENSMUST00000211024 367 ntBASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a3E9PWQ3 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm24982-201ENSMUST00000104456 132 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm9308-201ENSMUST00000119073 448 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm6520-201ENSMUST00000200636 410 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm45782-201ENSMUST00000212670 366 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Gm37121-201ENSMUST00000192219 2556 ntBASIC6.04□□□□□ -1.44
Col6a3E9PWQ3 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms