Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.08□□□□□ -1.28
Trim39Q9ESN2 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim39Q9ESN2 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm11922-201ENSMUST00000118967 475 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm14869-201ENSMUST00000119007 884 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm11913-201ENSMUST00000119094 336 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm12817-201ENSMUST00000119622 610 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm12294-201ENSMUST00000119723 490 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm11904-201ENSMUST00000120562 248 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm14982-201ENSMUST00000121102 442 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm23205-201ENSMUST00000158671 103 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm16184-201ENSMUST00000162324 573 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm28542-201ENSMUST00000185545 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm28185-201ENSMUST00000186815 694 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm29659-201ENSMUST00000187063 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm28682-201ENSMUST00000187430 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm28738-201ENSMUST00000187480 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm29319-201ENSMUST00000188060 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm29312-201ENSMUST00000188724 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm29637-201ENSMUST00000188877 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm29181-201ENSMUST00000191288 696 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm43471-201ENSMUST00000197550 467 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm43235-201ENSMUST00000200121 297 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm42959-201ENSMUST00000202184 212 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm43973-201ENSMUST00000203562 210 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm7565-201ENSMUST00000203611 623 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm44743-201ENSMUST00000209062 386 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm45283-201ENSMUST00000210593 628 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm8189-203ENSMUST00000211159 1225 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm18729-201ENSMUST00000217230 621 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm7239-201ENSMUST00000220981 860 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 AC160930.1-201ENSMUST00000227194 337 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 CT030238.4-201ENSMUST00000228579 801 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 CT030662.3-201ENSMUST00000228751 476 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm44141-201ENSMUST00000204231 1583 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim39Q9ESN2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms