Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm12229-201ENSMUST00000120487 468 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm22820-201ENSMUST00000157205 329 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm23386-201ENSMUST00000158585 144 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm26381-201ENSMUST00000174895 92 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm21731-201ENSMUST00000079524 489 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdc40Q9DC48 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 AU020206-202ENSMUST00000206358 3009 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm22953-201ENSMUST00000116724 101 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm13400-201ENSMUST00000117436 380 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm15696-201ENSMUST00000121730 445 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm27602-201ENSMUST00000183861 111 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm15500-201ENSMUST00000071523 894 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.95□□□□□ -1.46
Cdc40Q9DC48 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.94□□□□□ -1.46
Cdc40Q9DC48 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdc40Q9DC48 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms