Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm5288-201ENSMUST00000198323 1119 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm2398-201ENSMUST00000218347 883 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm42727-201ENSMUST00000202446 2823 ntBASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Ddx56Q9D0R4 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm43523-201ENSMUST00000197397 2878 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm12468-201ENSMUST00000116189 404 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm13265-201ENSMUST00000118090 421 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm12752-201ENSMUST00000121657 811 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm5809-201ENSMUST00000121854 529 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Mir1907-201ENSMUST00000122509 90 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm27636-201ENSMUST00000184528 122 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm36965-201ENSMUST00000193797 394 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm43089-201ENSMUST00000199162 275 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm5995-201ENSMUST00000204107 1273 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm45279-201ENSMUST00000210315 391 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 AC156576.2-202ENSMUST00000222525 411 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ddx56Q9D0R4 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm26079-201ENSMUST00000104066 133 ntBASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ddx56Q9D0R4 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms