Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.65□□□□□ -1.51
Scrt1Q99M85 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Scrt1Q99M85 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
Scrt1Q99M85 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.65□□□□□ -1.51
Scrt1Q99M85 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.65□□□□□ -1.51
Scrt1Q99M85 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Scrt1Q99M85 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.65□□□□□ -1.51
Scrt1Q99M85 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm22194-201ENSMUST00000116869 95 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm13114-201ENSMUST00000117605 106 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm7212-201ENSMUST00000120817 348 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm16248-201ENSMUST00000124238 243 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Snora47-201ENSMUST00000157483 138 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm8582-201ENSMUST00000164061 789 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm18849-201ENSMUST00000189861 560 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm44436-201ENSMUST00000204200 1494 ntBASIC5.64□□□□□ -1.51
Scrt1Q99M85 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Scrt1Q99M85 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Cmah-208ENSMUST00000224819 9482 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm24888-201ENSMUST00000104387 130 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm22372-201ENSMUST00000104589 136 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm14550-201ENSMUST00000117918 407 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm13930-201ENSMUST00000118569 368 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm7058-201ENSMUST00000119209 902 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm14613-201ENSMUST00000122239 752 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm25722-201ENSMUST00000157498 279 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm25363-201ENSMUST00000158850 245 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm24735-201ENSMUST00000158859 118 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Mir3097-201ENSMUST00000175356 67 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm25065-201ENSMUST00000177914 132 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm25891-201ENSMUST00000180050 132 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm29519-201ENSMUST00000186994 398 ntBASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.63□□□□□ -1.51
Scrt1Q99M85 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms