Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Pcdha9Q91Y11 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Pcdha9Q91Y11 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Pcdha9Q91Y11 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Pcdha9Q91Y11 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Pcdha9Q91Y11 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Pcdha9Q91Y11 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm23768-201ENSMUST00000104440 131 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm12874-201ENSMUST00000117190 913 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm13532-201ENSMUST00000120373 240 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm25047-201ENSMUST00000122667 104 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Mir3060-201ENSMUST00000175339 83 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm38030-201ENSMUST00000192376 475 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm43765-201ENSMUST00000196303 893 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm42824-201ENSMUST00000199361 247 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm2225-201ENSMUST00000209570 377 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 AC167202.1-201ENSMUST00000219027 331 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm18591-201ENSMUST00000220568 763 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm19340-201ENSMUST00000221995 345 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.9□□□□□ -1.3
Pcdha9Q91Y11 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Pcdha9Q91Y11 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm24142-201ENSMUST00000101960 107 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm12937-201ENSMUST00000118333 448 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm13156-201ENSMUST00000118348 321 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm12788-201ENSMUST00000119090 308 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm16511-201ENSMUST00000120019 564 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm22600-201ENSMUST00000157598 269 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Pcdha9Q91Y11 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms