Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm15125-201ENSMUST00000116185 800 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm15779-201ENSMUST00000117470 412 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm13359-201ENSMUST00000119000 695 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm16053-201ENSMUST00000120511 188 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm12754-201ENSMUST00000121908 454 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm29357-201ENSMUST00000186877 698 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm37884-201ENSMUST00000191857 818 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm37578-201ENSMUST00000192256 1177 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm18430-201ENSMUST00000197534 682 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm43476-201ENSMUST00000197873 405 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm5154-201ENSMUST00000203971 399 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm9357-201ENSMUST00000207138 805 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 AC107663.3-201ENSMUST00000225873 601 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm2531-201ENSMUST00000075609 512 ntBASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ndc1Q8VCB1 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Mir697-201ENSMUST00000102316 109 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm12468-201ENSMUST00000116189 404 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm12804-201ENSMUST00000121030 999 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm14353-201ENSMUST00000122200 869 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm24962-201ENSMUST00000157917 109 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm24228-201ENSMUST00000158829 129 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm17655-201ENSMUST00000167969 255 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm18191-201ENSMUST00000174624 824 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm24756-201ENSMUST00000177002 96 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm29525-201ENSMUST00000189844 699 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm29523-201ENSMUST00000191415 699 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm37689-201ENSMUST00000193139 275 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm18382-201ENSMUST00000194394 582 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm18843-201ENSMUST00000194982 719 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm8891-201ENSMUST00000198546 832 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.55□□□□□ -1.36
Ndc1Q8VCB1 Gm44943-201ENSMUST00000207254 300 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms