Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm25785-201ENSMUST00000104129 125 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm12507-201ENSMUST00000119155 415 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm8312-201ENSMUST00000119380 618 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm11472-201ENSMUST00000121305 556 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm6067-201ENSMUST00000121648 491 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm11609-201ENSMUST00000121926 793 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm14747-201ENSMUST00000149888 984 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm9167-201ENSMUST00000182469 962 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Mir6337-201ENSMUST00000184194 105 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm29356-201ENSMUST00000186935 373 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm8826-201ENSMUST00000193161 948 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Trdv3-201ENSMUST00000198551 309 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm44869-201ENSMUST00000208836 357 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
CopaQ8CIE6 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CopaQ8CIE6 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CopaQ8CIE6 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CopaQ8CIE6 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CopaQ8CIE6 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CopaQ8CIE6 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CopaQ8CIE6 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CopaQ8CIE6 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.71□□□□□ -1.33
CopaQ8CIE6 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
CopaQ8CIE6 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm23979-201ENSMUST00000104071 128 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm13176-201ENSMUST00000117910 477 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm11318-201ENSMUST00000118640 961 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm4992-201ENSMUST00000120256 768 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Mir1953-201ENSMUST00000157866 89 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm11107-201ENSMUST00000165414 505 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm23968-201ENSMUST00000175047 125 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm29464-201ENSMUST00000187692 513 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm21728-201ENSMUST00000188442 695 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm21889-201ENSMUST00000188487 695 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20932-201ENSMUST00000189115 694 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm21920-201ENSMUST00000190042 695 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm35323-201ENSMUST00000191836 499 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.71□□□□□ -1.34
CopaQ8CIE6 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.71□□□□□ -1.34
CopaQ8CIE6 CT030194.1-201ENSMUST00000225507 532 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms