Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Mir199b-201ENSMUST00000175066 110 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm37376-201ENSMUST00000192176 453 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm37024-201ENSMUST00000192224 868 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm17934-201ENSMUST00000192818 422 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm19060-201ENSMUST00000201959 421 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm44432-201ENSMUST00000203342 938 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm24200-201ENSMUST00000082955 157 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Mir143-201ENSMUST00000083511 63 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Rian-209ENSMUST00000182406 3476 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm10744-201ENSMUST00000220184 2706 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm8761-201ENSMUST00000121507 955 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm11804-201ENSMUST00000121663 468 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Mir7028-201ENSMUST00000185016 64 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm29813-201ENSMUST00000195856 447 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm23330-201ENSMUST00000082660 164 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm7676-201ENSMUST00000084055 319 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a6Q8C6K9 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm37924-201ENSMUST00000195470 3647 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm8855-201ENSMUST00000118888 878 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm14746-201ENSMUST00000120309 741 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm37770-201ENSMUST00000192855 772 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm42799-201ENSMUST00000201331 328 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm43456-201ENSMUST00000202519 457 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm43946-201ENSMUST00000204058 886 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm30698-201ENSMUST00000214789 3198 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm44996-201ENSMUST00000208787 2980 ntBASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col6a6Q8C6K9 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms